EnhancerDB
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  3. rs7720310[chr5:77809608]
Enhancers that have rs7720310[chr5:77809608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77809306 77809707 vista48140
VISTA
Transcript factors that have rs7720310[chr5:77809608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77809596 77809614 IRF2 JASPAR yes 63594988
chr5 77809596 77809614 IRF2 JASPAR yes 70668342
chr5 77809598 77809613 LEF1 JASPAR yes 63594989
chr5 77809598 77809613 LEF1 JASPAR yes 70668343
chr5 77809599 77809614 PRDM1 JASPAR yes 63594990
chr5 77809599 77809614 PRDM1 JASPAR yes 70668344
Genes associated with rs7720310[chr5:77809608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More