EnhancerDB
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  3. rs7728629[chr5:172263922]
Enhancers that have rs7728629[chr5:172263922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7728629[chr5:172263922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172263916 172263931 HNF4A JASPAR yes 67832619
chr5 172263917 172263932 HNF4G JASPAR yes 67832620
chr5 172263921 172263927 TCF4 TRANSFAC yes 67832621
Genes associated with rs7728629[chr5:172263922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More