EnhancerDB
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  3. rs77323200[chr1:41857543]
Enhancers that have rs77323200[chr1:41857543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs77323200[chr1:41857543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41857533 41857544 USF1 JASPAR yes 28384205
chr1 41857533 41857544 USF2 JASPAR yes 28384206
chr1 41857542 41857556 TLX1 JASPAR yes 28384207
chr1 41857543 41857557 TLX1 JASPAR yes 28384208
Genes associated with rs77323200[chr1:41857543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More