EnhancerDB
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  3. rs77396239[chr1:90377092]
Enhancers that have rs77396239[chr1:90377092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77396239[chr1:90377092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90376431 90377105 TCF12 UCSC Txn Factor no Conserved 107813892
chr1 90376529 90377105 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813900
chr1 90376530 90377180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813901
chr1 90377080 90377095 NR2C2 JASPAR yes 30633594
Genes associated with rs77396239[chr1:90377092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More