EnhancerDB
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Enhancers that have rs77400978[chr12:58238408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 58238225 58238735 vista13676
VISTA
Transcript factors that have rs77400978[chr12:58238408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58238071 58238661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551515
chr12 58238071 58238661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108040590
chr12 58238298 58241375 POLR2A UCSC Txn Factor no Conserved 108040591
chr12 58238344 58238800 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21551516
chr12 58238344 58238800 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108040592
chr12 58238352 58239077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21551517
chr12 58238352 58239077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108040593
chr12 58238363 58238863 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551518
chr12 58238363 58238863 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108040594
chr12 58238390 58238820 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551519
chr12 58238390 58238820 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108040595
chr12 58238405 58238738 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21551520
chr12 58238405 58238738 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108040596
chr12 58238407 58238412 ETS2 TRANSFAC yes 82416875
chr12 58238407 58238412 ETS2 TRANSFAC yes 121142588
Genes associated with rs77400978[chr12:58238408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More