EnhancerDB
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  3. rs77409634[chr12:125223934]
Enhancers that have rs77409634[chr12:125223934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77409634[chr12:125223934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125223316 125223940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582511
chr12 125223557 125223939 ZNF274 GTRD no Cervix (HeLa-S3) 21582520
chr12 125223798 125224074 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582522
chr12 125223926 125223940 ZIC1 JASPAR yes 124415904
chr12 125223926 125223941 ZIC3 JASPAR yes 124415905
chr12 125223926 125223941 ZIC4 JASPAR yes 124415906
Genes associated with rs77409634[chr12:125223934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More