EnhancerDB
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  3. rs77476380[chr16:85246417]
Enhancers that have rs77476380[chr16:85246417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77476380[chr16:85246417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85245005 85246460 ZNF274 GTRD no Cervix (HeLa-S3) 21721212
chr16 85245103 85246491 ZNF143 GTRD no Epithelial (MCF-7) 21721214
chr16 85245124 85246453 ZNF143 GTRD no Epithelial (MCF-7) 21721216
chr16 85245134 85246430 ZNF274 GTRD no Blood (GM12878) 21721217
chr16 85245155 85246844 ZNF274 GTRD no Bone Marrow (K562) 21721219
chr16 85245178 85247005 ZNF274 GTRD no Bone Marrow (K562) 21721222
chr16 85245183 85246450 ZNF143 GTRD no Epithelial (MCF-7) 21721225
chr16 85245196 85246444 ZNF143 GTRD no Epithelial (MCF-7) 21721226
chr16 85245248 85246549 ZNF143 GTRD no Epithelial (MCF-7) 21721233
chr16 85245430 85246461 ZNF274 GTRD no Blood (GM12878) 21721255
chr16 85245458 85247432 ZNF274 GTRD no Blood (GM12878) 21721259
chr16 85245525 85246752 ZNF274 GTRD no Bone Marrow (K562) 21721266
chr16 85245584 85246918 ZNF274 GTRD no Bone Marrow (K562) 21721275
chr16 85245617 85246535 ZNF143 GTRD no Epithelial (MCF-7) 21721284
chr16 85245623 85247015 ZNF143 GTRD no Epithelial (MCF-7) 21721286
chr16 85245641 85246513 ZNF143 GTRD no Epithelial (MCF-7) 21721291
chr16 85245653 85246626 ZNF143 GTRD no Epithelial (MCF-7) 21721294
chr16 85245673 85246493 ZNF143 GTRD no Epithelial (MCF-7) 21721304
chr16 85245680 85247063 ZNF143 GTRD no Epithelial (MCF-7) 21721306
chr16 85246216 85246536 TCF7L2 GTRD no Colon (HCT116) 21721322
chr16 85246236 85246496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721323
chr16 85246241 85246481 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721324
chr16 85246259 85246461 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721325
chr16 85246281 85246802 ZNF274 GTRD no Bone Marrow (K562) 21721326
chr16 85246294 85246784 ZNF274 GTRD no Bone Marrow (K562) 21721327
chr16 85246294 85246808 ZBTB33 GTRD no Brain (SK-N-SH) 21721328
chr16 85246299 85246743 ZNF274 GTRD no Bone Marrow (K562) 21721329
chr16 85246300 85246699 ZNF274 GTRD no Bone Marrow (K562) 21721330
chr16 85246350 85246957 TCF7L2 GTRD no Colon (HCT116) 21721331
chr16 85246351 85246699 ZNF274 GTRD no Bone Marrow (K562) 21721332
chr16 85246360 85246807 ZBTB33 GTRD no Brain (SK-N-SH) 21721333
chr16 85246377 85246671 ZNF274 GTRD no Bone Marrow (K562) 21721334
chr16 85246384 85248347 TCF7L2 GTRD no Colon (HCT116) 21721335
chr16 85246402 85246417 FOXP1 JASPAR yes 12033368
Genes associated with rs77476380[chr16:85246417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More