EnhancerDB
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  3. rs77511469[chr1:19776475]
Enhancers that have rs77511469[chr1:19776475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77511469[chr1:19776475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19776469 19776484 HNF1A JASPAR yes 27191900
chr1 19776470 19776483 HNF1B JASPAR yes 27191901
chr1 19776470 19776486 POU4F3 JASPAR yes 27191902
chr1 19776473 19776483 GSX2 JASPAR yes 27191903
chr1 19776473 19776483 HOXB2 JASPAR yes 27191904
chr1 19776473 19776483 HOXB3 JASPAR yes 27191905
chr1 19776473 19776483 MNX1 JASPAR yes 27191906
chr1 19776473 19776483 POU6F1 JASPAR yes 27191907
chr1 19776473 19776484 HOXA10 JASPAR yes 27191908
chr1 19776474 19776482 LMX1A JASPAR yes 27191909
chr1 19776474 19776482 LMX1B JASPAR yes 27191910
chr1 19776474 19776482 NKX6-1 JASPAR yes 27191911
chr1 19776474 19776482 NKX6-2 JASPAR yes 27191912
chr1 19776474 19776482 VAX1 JASPAR yes 27191913
chr1 19776474 19776482 VAX2 JASPAR yes 27191914
chr1 19776474 19776482 VSX1 JASPAR yes 27191915
chr1 19776474 19776482 VSX2 JASPAR yes 27191916
Genes associated with rs77511469[chr1:19776475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More