EnhancerDB
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  3. rs77527340[chr1:203520183]
Enhancers that have rs77527340[chr1:203520183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs77527340[chr1:203520183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518614 203520743 ZBTB33 GTRD no Brain (SK-N-SH) 21369441
chr1 203518802 203522161 ZNF274 GTRD no Cervix (HeLa-S3) 21369442
chr1 203518877 203522236 ZBTB33 GTRD no Brain (SK-N-SH) 21369443
chr1 203518928 203520793 ZBTB33 GTRD no Brain (SK-N-SH) 21369444
chr1 203519065 203520332 SOX2 GTRD no Neural Stem Cells (H9) 21369448
chr1 203519232 203521926 ZBTB33 GTRD no Brain (SK-N-SH) 21369457
chr1 203519275 203521022 ZNF274 GTRD no Cervix (HeLa-S3) 21369460
chr1 203519297 203521969 ZNF274 GTRD no Cervix (HeLa-S3) 21369462
chr1 203519983 203520939 ZNF274 GTRD no Cervix (HeLa-S3) 21369468
chr1 203520173 203520183 MSC JASPAR yes 34638913
chr1 203520173 203520183 TFAP4 JASPAR yes 34638914
Genes associated with rs77527340[chr1:203520183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More