EnhancerDB
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  3. rs77543078[chr1:229361157]
Enhancers that have rs77543078[chr1:229361157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs77543078[chr1:229361157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229360973 229361569 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21390825
chr1 229360998 229361502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390826
chr1 229361118 229361494 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21390827
chr1 229361123 229361459 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390828
chr1 229361142 229361157 ESR2 JASPAR yes 35976860
Genes associated with rs77543078[chr1:229361157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More