EnhancerDB
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  3. rs77789426[chr1:39603603]
Enhancers that have rs77789426[chr1:39603603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77789426[chr1:39603603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39603592 39603611 PAX5 JASPAR yes 28256711
chr1 39603599 39603608 HIC2 JASPAR yes 28256712
chr1 39603602 39603606 LFA1 TRANSFAC yes 28256713
Genes associated with rs77789426[chr1:39603603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More