EnhancerDB
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  3. rs77858948[chr12:109239161]
Enhancers that have rs77858948[chr12:109239161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs77858948[chr12:109239161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109239150 109239161 CDX2 JASPAR yes 123626357
chr12 109239151 109239162 HOXA10 JASPAR yes 123626358
chr12 109239155 109239163 FOXG1 JASPAR yes 123626359
Genes associated with rs77858948[chr12:109239161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More