EnhancerDB
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  3. rs778601030[chr1:235072035]
Enhancers that have rs778601030[chr1:235072035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235041625 235072655 enh12798
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs778601030[chr1:235072035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235071894 235072719 ZNF274 GTRD no Blood (GM12878) 21400935
chr1 235071894 235072719 ZNF274 GTRD no Blood (GM12878) 107884459
chr1 235072017 235080661 ZBTB33 GTRD no Lung (A549) 107884460
chr1 235072032 235072047 FOXP1 JASPAR yes 36332688
chr1 235072033 235072048 FOXP1 JASPAR yes 36332689
chr1 235072034 235072049 FOXP1 JASPAR yes 36332690
chr1 235072034 235072055 IRF1 JASPAR yes 36332691
chr1 235072035 235072050 FOXP1 JASPAR yes 36332692
chr1 235072035 235072056 IRF1 JASPAR yes 36332693
Genes associated with rs778601030[chr1:235072035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More