EnhancerDB
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  3. rs77926854[chr1:39600651]
Enhancers that have rs77926854[chr1:39600651]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77926854[chr1:39600651]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39600637 39600653 ZNF143 JASPAR yes 28256222
chr1 39600640 39600661 IRF1 JASPAR yes 28256223
chr1 39600645 39600663 NR3C1 JASPAR yes 28256224
chr1 39600646 39600667 IRF1 JASPAR yes 28256225
chr1 39600648 39600663 STAT2 JASPAR yes 28256226
chr1 39600649 39600663 SPIC JASPAR yes 28256227
chr1 39600649 39600663 STAT1 JASPAR yes 28256228
chr1 39600650 39600664 IRF7 JASPAR yes 28256229
chr1 39600650 39600664 IRF8 JASPAR yes 28256230
chr1 39600650 39600665 IRF9 JASPAR yes 28256231
Genes associated with rs77926854[chr1:39600651], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More