EnhancerDB
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  3. rs77941549[chr12:125196400]
Enhancers that have rs77941549[chr12:125196400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77941549[chr12:125196400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125194329 125196454 ZNF274 GTRD no Bone Marrow (K562) 21582151
chr12 125196394 125196415 IRF1 JASPAR yes 124412072
chr12 125196395 125196410 FOXP1 JASPAR yes 124412073
chr12 125196395 125196416 IRF1 JASPAR yes 124412074
chr12 125196397 125196412 FOXP1 JASPAR yes 124412075
chr12 125196397 125196418 IRF1 JASPAR yes 124412076
chr12 125196398 125196419 IRF1 JASPAR yes 124412077
chr12 125196399 125196414 FOXP1 JASPAR yes 124412078
chr12 125196399 125196420 IRF1 JASPAR yes 124412079
chr12 125196400 125196415 FOXP1 JASPAR yes 124412080
chr12 125196400 125196421 IRF1 JASPAR yes 124412081
Genes associated with rs77941549[chr12:125196400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More