EnhancerDB
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  3. rs77960006[chr6:36632165]
Enhancers that have rs77960006[chr6:36632165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs77960006[chr6:36632165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36632151 36632165 RORA JASPAR yes 101356242
chr6 36632153 36632171 IRF2 JASPAR yes 101356243
chr6 36632154 36632175 IRF1 JASPAR yes 101356244
chr6 36632156 36632171 PRDM1 JASPAR yes 101356245
chr6 36632156 36632171 STAT2 JASPAR yes 101356246
chr6 36632157 36632171 STAT1 JASPAR yes 101356247
chr6 36632158 36632170 IRF1 JASPAR yes 101356248
chr6 36632158 36632172 IRF7 JASPAR yes 101356249
chr6 36632158 36632172 IRF8 JASPAR yes 101356250
chr6 36632158 36632173 IRF9 JASPAR yes 101356251
chr6 36632163 36632167 YY1 TRANSFAC yes 101356252
chr6 36632165 36632175 HOXA13 JASPAR yes 101356253
chr6 36632165 36632175 HOXB13 JASPAR yes 101356254
chr6 36632165 36632175 HOXD13 JASPAR yes 101356255
chr6 36632165 36632176 HOXA10 JASPAR yes 101356256
Genes associated with rs77960006[chr6:36632165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More