EnhancerDB
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  3. rs78012054[chr17:41488970]
Enhancers that have rs78012054[chr17:41488970]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78012054[chr17:41488970]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41488949 41488970 ZNF263 JASPAR yes 54343722
chr17 41488951 41488972 IRF1 JASPAR yes 54343723
chr17 41488952 41488973 ZNF263 JASPAR yes 54343724
chr17 41488959 41488974 PRDM1 JASPAR yes 54343725
chr17 41488968 41488978 HOXA13 JASPAR yes 54343726
Genes associated with rs78012054[chr17:41488970], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More