EnhancerDB
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  3. rs78025628[chr11:65198182]
Enhancers that have rs78025628[chr11:65198182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78025628[chr11:65198182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977988
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977989
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977990
chr11 65190103 65198420 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21492166
chr11 65190110 65199314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492171
chr11 65197136 65198349 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492650
chr11 65197650 65198186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492679
chr11 65197733 65198329 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21492682
chr11 65197959 65198435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492683
chr11 65198045 65198385 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21492684
chr11 65198065 65198360 TCF7L2 GTRD no Colon (HCT116) 21492685
chr11 65198111 65198387 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492686
chr11 65198177 65198182 GATA2 JASPAR yes 39315445
Genes associated with rs78025628[chr11:65198182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More