EnhancerDB
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  3. rs78039197[chr16:85225058]
Enhancers that have rs78039197[chr16:85225058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78039197[chr16:85225058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85222935 85229799 ZNF274 GTRD no Blood (GM12878) 21720680
chr16 85223400 85229241 ZNF274 GTRD no Blood (GM12878) 21720683
chr16 85224838 85231028 ZNF274 GTRD no Blood (GM12878) 21720704
chr16 85224847 85226192 ZNF274 GTRD no Blood (GM12878) 21720705
chr16 85224851 85225690 ZNF274 GTRD no Blood (GM12878) 21720706
chr16 85224853 85225578 ZNF274 GTRD no Blood (GM12878) 21720707
chr16 85224854 85225685 ZNF143 GTRD no Epithelial (MCF-7) 21720708
chr16 85224979 85226496 ZNF274 GTRD no Blood (GM12878) 21720709
chr16 85225051 85225069 IRF2 JASPAR yes 12030528
chr16 85225052 85225073 IRF1 JASPAR yes 12030529
chr16 85225054 85225069 PRDM1 JASPAR yes 12030530
chr16 85225054 85225069 STAT2 JASPAR yes 12030531
chr16 85225056 85225068 IRF1 JASPAR yes 12030532
chr16 85225056 85225070 IRF7 JASPAR yes 12030533
chr16 85225056 85225070 IRF8 JASPAR yes 12030534
chr16 85225056 85225071 IRF9 JASPAR yes 12030535
Genes associated with rs78039197[chr16:85225058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More