EnhancerDB
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  3. rs78047139[chr11:122538637]
Enhancers that have rs78047139[chr11:122538637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78047139[chr11:122538637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122538630 122538648 IRF2 JASPAR yes 42016763
chr11 122538631 122538652 IRF1 JASPAR yes 42016764
chr11 122538633 122538648 STAT2 JASPAR yes 42016765
chr11 122538634 122538648 STAT1 JASPAR yes 42016766
Genes associated with rs78047139[chr11:122538637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 122709208 122743347 + CRTAM ENSG00000109943.4 122709208 170571 Lung 0.115125 11553