EnhancerDB
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  3. rs78049429[chr17:57837106]
Enhancers that have rs78049429[chr17:57837106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78049429[chr17:57837106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 21775327
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276471
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276472
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276473
chr17 57836889 57837996 AR GTRD no Prostate (PC-3) 21775472
chr17 57836889 57837996 AR GTRD no Prostate (PC-3) 108276689
chr17 57836896 57839878 ZNF274 GTRD no Liver (HepG2) 21775473
chr17 57836896 57839878 ZNF274 GTRD no Liver (HepG2) 108276690
chr17 57837105 57837109 H4TF2 TRANSFAC yes 55078399
Genes associated with rs78049429[chr17:57837106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More