EnhancerDB
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  3. rs78060864[chr10:21643549]
Enhancers that have rs78060864[chr10:21643549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78060864[chr10:21643549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21642876 21643621 ZNF143 GTRD no Epithelial (MCF-7) 21420988
chr10 21642957 21643765 ZNF143 GTRD no Epithelial (MCF-7) 21420989
chr10 21642976 21643633 ZNF143 GTRD no Epithelial (MCF-7) 21420990
chr10 21643117 21643618 ZNF143 GTRD no Epithelial (MCF-7) 21420991
chr10 21643117 21643669 ZNF143 GTRD no Epithelial (MCF-7) 21420992
chr10 21643121 21643585 ZNF143 GTRD no Epithelial (MCF-7) 21420993
chr10 21643537 21643549 HNF1B JASPAR yes 125900513
chr10 21643542 21643552 HOXC10 JASPAR yes 125900514
chr10 21643542 21643552 HOXD11 JASPAR yes 125900515
chr10 21643542 21643553 HOXC11 JASPAR yes 125900516
chr10 21643542 21643553 HOXC12 JASPAR yes 125900517
chr10 21643542 21643553 HOXD12 JASPAR yes 125900518
chr10 21643546 21643555 VENTX JASPAR yes 125900520
chr10 21643547 21643560 DUXA JASPAR yes 125900521
Genes associated with rs78060864[chr10:21643549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More