EnhancerDB
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  3. rs78062953[chr2:238523444]
Enhancers that have rs78062953[chr2:238523444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238519874 238529599 enh19399
Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr2 238522379 238526567 vista1020
VISTA
Transcript factors that have rs78062953[chr2:238523444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238523005 238523470 CTCF UCSC Txn Factor no Conserved 107690856
chr2 238523005 238523470 CTCF UCSC Txn Factor no Conserved 108435933
chr2 238523444 238523454 RELA JASPAR yes 68303093
chr2 238523444 238523454 RELA JASPAR yes 82124618
Genes associated with rs78062953[chr2:238523444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More