EnhancerDB
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  3. rs780735807[chr17:55998606]
Enhancers that have rs780735807[chr17:55998606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs780735807[chr17:55998606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55998596 55998606 HOXB13 JASPAR yes 54999573
chr17 55998596 55998606 HOXD13 JASPAR yes 54999574
chr17 55998602 55998616 E2F7 JASPAR yes 54999578
chr17 55998606 55998619 NFKB1 JASPAR yes 54999579
chr17 55998606 55998619 NFKB2 JASPAR yes 54999580
Genes associated with rs780735807[chr17:55998606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More