EnhancerDB
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  3. rs78099894[chr1:117397250]
Enhancers that have rs78099894[chr1:117397250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78099894[chr1:117397250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117396032 117397595 ZNF143 GTRD no Epithelial (MCF-7) 21333947
chr1 117396627 117397543 ZNF143 GTRD no Epithelial (MCF-7) 21333961
chr1 117396660 117397678 ZNF143 GTRD no Epithelial (MCF-7) 21333962
chr1 117396680 117397681 ZNF143 GTRD no Epithelial (MCF-7) 21333963
chr1 117396684 117397690 ZNF143 GTRD no Epithelial (MCF-7) 21333964
chr1 117396763 117397694 ZNF143 GTRD no Epithelial (MCF-7) 21333965
chr1 117396823 117397569 ZNF143 GTRD no Epithelial (MCF-7) 21333966
chr1 117396897 117397571 ZNF143 GTRD no Epithelial (MCF-7) 21333967
chr1 117396903 117397465 ZNF143 GTRD no Epithelial (MCF-7) 21333968
chr1 117396969 117397398 ZNF143 GTRD no Epithelial (MCF-7) 21333970
chr1 117397033 117397474 ZNF143 GTRD no Epithelial (MCF-7) 21333972
chr1 117397066 117397433 ZNF143 GTRD no Epithelial (MCF-7) 21333973
chr1 117397250 117397253 MYB TRANSFAC yes 31844950
Genes associated with rs78099894[chr1:117397250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More