EnhancerDB
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  3. rs78108742[chr1:8200710]
Enhancers that have rs78108742[chr1:8200710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs78108742[chr1:8200710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8200708 8200716 TBX5 JASPAR yes 26518590
chr1 8200708 8200717 ZEB1 JASPAR yes 26518591
chr1 8200708 8200723 SCRT1 JASPAR yes 26518592
chr1 8200709 8200719 FIGLA JASPAR yes 26518593
chr1 8200709 8200719 ID4 JASPAR yes 26518594
chr1 8200709 8200719 TCF3 JASPAR yes 26518595
chr1 8200709 8200719 TCF4 JASPAR yes 26518596
chr1 8200710 8200719 SNAI2 JASPAR yes 26518597
chr1 8200710 8200723 SCRT2 JASPAR yes 26518598
Genes associated with rs78108742[chr1:8200710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More