EnhancerDB
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  3. rs78129412[chr11:62268077]
Enhancers that have rs78129412[chr11:62268077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62267714 62268111 vista10501
VISTA
Transcript factors that have rs78129412[chr11:62268077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62267249 62268161 P63 GTRD no Skin (Keratinocyte) 21488816
chr11 62267249 62268161 P63 GTRD no Skin (Keratinocyte) 107974487
chr11 62267273 62268136 P63 GTRD no Skin (Keratinocyte) 21488817
chr11 62267273 62268136 P63 GTRD no Skin (Keratinocyte) 107974488
chr11 62267433 62268188 P63 GTRD no Skin (Keratinocyte) 21488818
chr11 62267433 62268188 P63 GTRD no Skin (Keratinocyte) 107974489
chr11 62267644 62268106 ZNF274 GTRD no Cervix (HeLa-S3) 21488821
chr11 62267644 62268106 ZNF274 GTRD no Cervix (HeLa-S3) 107974492
chr11 62267756 62268212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21488825
chr11 62267756 62268212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107974497
chr11 62267833 62268223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21488831
chr11 62267833 62268223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107974504
chr11 62267838 62268158 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21488832
chr11 62267838 62268158 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107974505
chr11 62267868 62268138 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107974507
chr11 62267870 62268150 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21488834
chr11 62267870 62268150 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107974508
chr11 62268069 62268079 NKX2-3 JASPAR yes 39209370
chr11 62268069 62268079 NKX2-3 JASPAR yes 114080492
Genes associated with rs78129412[chr11:62268077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More