EnhancerDB
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  3. rs78153923[chr17:48963133]
Enhancers that have rs78153923[chr17:48963133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs78153923[chr17:48963133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48961931 48963720 TCF7L2 GTRD no Colon (HCT116) 21770234
chr17 48962814 48963469 ZNF143 GTRD no Epithelial (MCF-7) 21770250
chr17 48963122 48963133 TBX20 JASPAR yes 54728967
chr17 48963122 48963133 TBX2 JASPAR yes 54728968
chr17 48963122 48963135 EOMES JASPAR yes 54728969
chr17 48963123 48963133 TBR1 JASPAR yes 54728975
chr17 48963123 48963136 SMAD2 JASPAR yes 54728976
chr17 48963129 48963370 ZNF143 GTRD no Epithelial (MCF-7) 21770251
Genes associated with rs78153923[chr17:48963133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More