EnhancerDB
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  3. rs78169850[chr5:173190235]
Enhancers that have rs78169850[chr5:173190235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78169850[chr5:173190235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173190233 173190246 ZBTB18 JASPAR yes 67901818
chr5 173190234 173190246 NHLH1 JASPAR yes 67901819
chr5 173190235 173190245 NHLH1 JASPAR yes 67901820
Genes associated with rs78169850[chr5:173190235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More