EnhancerDB
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  3. rs78220499[chr17:57827523]
Enhancers that have rs78220499[chr17:57827523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78220499[chr17:57827523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57827511 57827524 POU2F2 JASPAR yes 55076759
chr17 57827511 57827525 POU1F1 JASPAR yes 55076760
chr17 57827512 57827524 POU3F1 JASPAR yes 55076761
chr17 57827512 57827524 POU3F2 JASPAR yes 55076762
chr17 57827512 57827525 POU3F3 JASPAR yes 55076763
chr17 57827513 57827525 POU2F1 JASPAR yes 55076764
chr17 57827514 57827523 POU3F4 JASPAR yes 55076769
chr17 57827514 57827523 POU5F1B JASPAR yes 55076770
chr17 57827521 57827524 MYB TRANSFAC yes 55076771
Genes associated with rs78220499[chr17:57827523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More