EnhancerDB
  1. Home
  2. SNP
  3. rs78233226[chr1:117416312]
Enhancers that have rs78233226[chr1:117416312]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs78233226[chr1:117416312]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117416129 117416355 ZBTB33 GTRD no Brain (SK-N-SH) 21334017
chr1 117416309 117416324 TFAP2C JASPAR yes 31847165
chr1 117416311 117416323 TFAP2A JASPAR yes 31847166
Genes associated with rs78233226[chr1:117416312], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More