EnhancerDB
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  3. rs78247454[chr5:79493279]
Enhancers that have rs78247454[chr5:79493279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78247454[chr5:79493279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79493279 79493290 TFAP2A JASPAR yes 63705288
chr5 79493279 79493290 TFAP2B JASPAR yes 63705289
chr5 79493279 79493290 TFAP2C JASPAR yes 63705290
Genes associated with rs78247454[chr5:79493279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More