EnhancerDB
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  3. rs78287826[chr15:42218503]
Enhancers that have rs78287826[chr15:42218503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78287826[chr15:42218503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42218496 42218514 ESR1 JASPAR yes 23006030
chr15 42218499 42218504 SP1 TRANSFAC yes 23006031
chr15 42218500 42218510 SP1 JASPAR yes 23006032
chr15 42218500 42218518 ESR1 JASPAR yes 23006033
chr15 42218502 42218506 LFA1 TRANSFAC yes 23006034
Genes associated with rs78287826[chr15:42218503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More