EnhancerDB
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  3. rs78288853[chr1:171405355]
Enhancers that have rs78288853[chr1:171405355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs78288853[chr1:171405355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 21349656
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 107845400
chr1 171404597 171405826 ZBTB33 GTRD no Lung (A549) 21349689
chr1 171404597 171405826 ZBTB33 GTRD no Lung (A549) 107845401
chr1 171404629 171405736 ZBTB33 GTRD no Lung (A549) 21349690
chr1 171404629 171405736 ZBTB33 GTRD no Lung (A549) 107845403
chr1 171404701 171405594 ZNF143 GTRD no Epithelial (MCF-7) 21349691
chr1 171404701 171405594 ZNF143 GTRD no Epithelial (MCF-7) 107845405
chr1 171404724 171405408 ZNF143 GTRD no Epithelial (MCF-7) 21349692
chr1 171404724 171405408 ZNF143 GTRD no Epithelial (MCF-7) 107845406
chr1 171404733 171405720 ZNF143 GTRD no Epithelial (MCF-7) 21349693
chr1 171404733 171405720 ZNF143 GTRD no Epithelial (MCF-7) 107845407
chr1 171404735 171405711 ZNF274 GTRD no Bone Marrow (K562) 107845408
chr1 171404740 171405623 ZNF143 GTRD no Epithelial (MCF-7) 21349694
chr1 171404740 171405623 ZNF143 GTRD no Epithelial (MCF-7) 107845409
chr1 171404746 171405526 ZNF143 GTRD no Epithelial (MCF-7) 21349695
chr1 171404746 171405526 ZNF143 GTRD no Epithelial (MCF-7) 107845410
chr1 171404754 171405708 ZNF143 GTRD no Epithelial (MCF-7) 21349696
chr1 171404754 171405708 ZNF143 GTRD no Epithelial (MCF-7) 107845411
chr1 171404764 171405711 ZNF274 GTRD no Bone Marrow (K562) 107845413
chr1 171404807 171405775 ZNF274 GTRD no Cervix (HeLa-S3) 21349697
chr1 171404807 171405775 ZNF274 GTRD no Cervix (HeLa-S3) 107845414
chr1 171404828 171405472 ZNF274 GTRD no Bone Marrow (K562) 107845415
chr1 171404836 171405704 ZNF274 GTRD no Blood (GM12878) 107845416
chr1 171404858 171405555 ZBTB33 GTRD no Lung (A549) 21349698
chr1 171404858 171405555 ZBTB33 GTRD no Lung (A549) 107845417
chr1 171404871 171405574 ZNF143 GTRD no Epithelial (MCF-7) 21349699
chr1 171404871 171405574 ZNF143 GTRD no Epithelial (MCF-7) 107845418
chr1 171404875 171405658 ZNF143 GTRD no Epithelial (MCF-7) 21349700
chr1 171404875 171405658 ZNF143 GTRD no Epithelial (MCF-7) 107845419
chr1 171404887 171405464 ZBTB33 GTRD no Lung (A549) 21349701
chr1 171404887 171405464 ZBTB33 GTRD no Lung (A549) 107845420
chr1 171404891 171405413 ZNF143 GTRD no Epithelial (MCF-7) 21349702
chr1 171404891 171405413 ZNF143 GTRD no Epithelial (MCF-7) 107845421
chr1 171404915 171405682 ZNF274 GTRD no Blood (GM12878) 107845422
chr1 171404915 171405738 ZNF274 GTRD no Liver (HepG2) 107845423
chr1 171404930 171405614 ZNF274 GTRD no Bone Marrow (K562) 107845424
chr1 171404941 171405408 ZNF143 GTRD no Epithelial (MCF-7) 21349703
chr1 171404941 171405408 ZNF143 GTRD no Epithelial (MCF-7) 107845425
chr1 171404951 171405572 ZNF143 GTRD no Epithelial (MCF-7) 21349704
chr1 171404951 171405572 ZNF143 GTRD no Epithelial (MCF-7) 107845426
chr1 171404957 171405618 ZNF274 GTRD no Blood (GM12878) 107845427
chr1 171404977 171405469 ZNF274 GTRD no Bone Marrow (K562) 107845428
chr1 171404983 171405471 ZNF274 GTRD no Liver (HepG2) 107845429
chr1 171404994 171405476 ZBTB33 GTRD no Lung (A549) 21349705
chr1 171404994 171405476 ZBTB33 GTRD no Lung (A549) 107845430
chr1 171404997 171405582 ZBTB33 GTRD no Lung (A549) 21349706
chr1 171404997 171405582 ZBTB33 GTRD no Lung (A549) 107845431
chr1 171405001 171405445 ZNF274 GTRD no Liver (HepG2) 107845432
chr1 171405018 171405403 ZNF143 GTRD no Epithelial (MCF-7) 21349707
chr1 171405018 171405403 ZNF143 GTRD no Epithelial (MCF-7) 107845433
chr1 171405035 171405480 ZNF274 GTRD no Liver (HepG2) 107845434
chr1 171405035 171405497 ZNF274 GTRD no Cervix (HeLa-S3) 21349708
chr1 171405035 171405497 ZNF274 GTRD no Cervix (HeLa-S3) 107845435
chr1 171405036 171405365 ZNF274 GTRD no Bone Marrow (K562) 107845436
chr1 171405041 171405445 ZNF274 GTRD no Liver (HepG2) 107845437
chr1 171405041 171405531 ZNF274 GTRD no Bone Marrow (K562) 107845438
chr1 171405047 171405401 CTCF GTRD no Kidney 107845439
chr1 171405069 171405410 TCF7L2 GTRD no Colon (HCT116) 21349709
chr1 171405072 171405395 ZNF143 GTRD no Epithelial (MCF-7) 21349710
chr1 171405073 171405556 ZNF274 GTRD no Cervix (HeLa-S3) 21349711
chr1 171405074 171405544 ZNF143 GTRD no Epithelial (MCF-7) 21349712
chr1 171405202 171405414 ZNF274 GTRD no Cervix (HeLa-S3) 21349713
Genes associated with rs78288853[chr1:171405355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More