EnhancerDB
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  3. rs78299747[chr2:232535231]
Enhancers that have rs78299747[chr2:232535231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78299747[chr2:232535231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535226 232535240 PLAG1 JASPAR yes 81734335
chr2 232535227 232535242 ZIC4 JASPAR yes 81734336
chr2 232535228 232535242 GLIS3 JASPAR yes 81734337
Genes associated with rs78299747[chr2:232535231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More