EnhancerDB
  1. Home
  2. SNP
  3. rs78365888[chr1:117422154]
Enhancers that have rs78365888[chr1:117422154]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs78365888[chr1:117422154]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117421581 117422257 KAP1 UCSC Txn Factor no Conserved 107825114
chr1 117421605 117422201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334050
chr1 117421605 117422201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825115
chr1 117421650 117422170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334051
chr1 117421650 117422170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825116
chr1 117421685 117422155 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21334052
chr1 117421685 117422155 GATA3 UCSC Txn Factor no Conserved 107825117
chr1 117421685 117422155 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107825118
chr1 117421750 117422474 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334054
chr1 117421750 117422474 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825120
chr1 117421750 117422474 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825121
chr1 117421971 117422191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334059
chr1 117421971 117422191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825126
chr1 117422148 117422158 RELA JASPAR yes 31848083
chr1 117422149 117422161 IRF1 JASPAR yes 31848084
Genes associated with rs78365888[chr1:117422154], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More