EnhancerDB
  1. Home
  2. SNP
  3. rs78371375[chr1:172326777]
Enhancers that have rs78371375[chr1:172326777]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78371375[chr1:172326777]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172326768 172326778 GSC2 JASPAR yes 33125628
chr1 172326768 172326778 GSC JASPAR yes 33125629
chr1 172326769 172326777 OTX2 JASPAR yes 33125630
Genes associated with rs78371375[chr1:172326777], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More