EnhancerDB
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  3. rs78406870[chr1:44011061]
Enhancers that have rs78406870[chr1:44011061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs78406870[chr1:44011061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44009528 44011639 TCF7L2 GTRD no Colon (HCT116) 107803030
chr1 44011059 44011070 ESRRA JASPAR yes 28504320
Genes associated with rs78406870[chr1:44011061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More