EnhancerDB
  1. Home
  2. SNP
  3. rs78420531[chr17:43249246]
Enhancers that have rs78420531[chr17:43249246]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs78420531[chr17:43249246]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43248830 43249360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763197
chr17 43248966 43249470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763199
chr17 43248970 43249620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763200
Genes associated with rs78420531[chr17:43249246], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More