EnhancerDB
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  3. rs78439982[chr17:25683164]
Enhancers that have rs78439982[chr17:25683164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78439982[chr17:25683164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25683074 25683410 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21747769
chr17 25683108 25683564 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747770
chr17 25683141 25683785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747771
chr17 25683145 25683441 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21747772
chr17 25683156 25683177 IRF1 JASPAR yes 53624002
chr17 25683160 25683175 IRF9 JASPAR yes 53624003
chr17 25683161 25683179 IRF2 JASPAR yes 53624004
chr17 25683162 25683183 IRF1 JASPAR yes 53624005
chr17 25683164 25683179 STAT2 JASPAR yes 53624006
Genes associated with rs78439982[chr17:25683164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More