EnhancerDB
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  3. rs78446606[chr17:2110905]
Enhancers that have rs78446606[chr17:2110905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78446606[chr17:2110905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2110900 2110915 MEF2A JASPAR yes 52737402
chr17 2110901 2110913 MEF2A JASPAR yes 52737403
chr17 2110901 2110913 MEF2B JASPAR yes 52737404
chr17 2110901 2110913 MEF2D JASPAR yes 52737405
chr17 2110902 2110912 MEF2A JASPAR yes 52737406
chr17 2110903 2110907 TEAD2 TRANSFAC yes 52737407
chr17 2110903 2110913 ALX3 JASPAR yes 52737408
chr17 2110903 2110913 GSX2 JASPAR yes 52737409
chr17 2110903 2110913 MNX1 JASPAR yes 52737410
chr17 2110904 2110912 LMX1A JASPAR yes 52737411
chr17 2110904 2110912 LMX1B JASPAR yes 52737412
chr17 2110904 2110912 NKX6-1 JASPAR yes 52737413
chr17 2110904 2110912 NKX6-2 JASPAR yes 52737414
chr17 2110904 2110912 VAX1 JASPAR yes 52737415
chr17 2110904 2110912 VAX2 JASPAR yes 52737416
chr17 2110904 2110912 VSX1 JASPAR yes 52737417
chr17 2110904 2110912 VSX2 JASPAR yes 52737418
chr17 2110904 2110920 POU4F2 JASPAR yes 52737419
chr17 2110904 2110920 POU4F3 JASPAR yes 52737420
chr17 2110905 2110916 FOXB1 JASPAR yes 52737421
chr17 2110905 2110916 PHOX2A JASPAR yes 52737422
chr17 2110905 2110916 PROP1 JASPAR yes 52737423
Genes associated with rs78446606[chr17:2110905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More