EnhancerDB
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  3. rs78448989[chr15:42203178]
Enhancers that have rs78448989[chr15:42203178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78448989[chr15:42203178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42203174 42203184 NFATC3 JASPAR yes 23003872
chr15 42203176 42203182 ETS1 JASPAR yes 23003873
chr15 42203176 42203187 NFKB1 JASPAR yes 23003874
Genes associated with rs78448989[chr15:42203178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More