EnhancerDB
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  3. rs78465403[chr16:88833116]
Enhancers that have rs78465403[chr16:88833116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78465403[chr16:88833116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88833116 88833130 ONECUT1 JASPAR yes 12301886
chr16 88833116 88833130 ONECUT2 JASPAR yes 12301887
chr16 88833116 88833130 ONECUT3 JASPAR yes 12301888
Genes associated with rs78465403[chr16:88833116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88704999 88706881 + IL17C ENSG00000124391.4 88704999 126235 Esophagus 0.205335 15156