EnhancerDB
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Enhancers that have rs78513841[chr17:28050934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
chr17 28050852 28051063 vista24358
VISTA
Transcript factors that have rs78513841[chr17:28050934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28050413 28051088 ZNF274 GTRD no Bone Marrow (K562) 21749590
chr17 28050413 28051088 ZNF274 GTRD no Bone Marrow (K562) 108248062
chr17 28050552 28051148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749591
chr17 28050552 28051148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248063
chr17 28050618 28050982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749592
chr17 28050618 28050982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248064
chr17 28050621 28050951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749593
chr17 28050621 28050951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248065
chr17 28050679 28050959 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749597
chr17 28050679 28050959 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248070
chr17 28050688 28051144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749598
chr17 28050688 28051144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248071
chr17 28050693 28051025 ZNF274 GTRD no Bone Marrow (K562) 21749599
chr17 28050693 28051025 ZNF274 GTRD no Bone Marrow (K562) 108248072
chr17 28050738 28051102 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749602
chr17 28050738 28051102 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248076
chr17 28050758 28051034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749603
chr17 28050758 28051034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248077
chr17 28050766 28051042 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749604
chr17 28050766 28051042 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248078
chr17 28050780 28050984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749605
chr17 28050780 28050984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248079
chr17 28050792 28051048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749606
chr17 28050792 28051048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248080
chr17 28050930 28050947 ZNF410 JASPAR yes 21216504
chr17 28050930 28050947 ZNF410 JASPAR yes 53753751
Genes associated with rs78513841[chr17:28050934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More