EnhancerDB
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  3. rs78524644[chr6:108911647]
Enhancers that have rs78524644[chr6:108911647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78524644[chr6:108911647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108911642 108911657 HNF4G JASPAR yes 104181018
chr6 108911642 108911657 LEF1 JASPAR yes 104181019
chr6 108911646 108911652 LEF1 TRANSFAC yes 104181020
chr6 108911646 108911652 SOX10 JASPAR yes 104181021
Genes associated with rs78524644[chr6:108911647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More