EnhancerDB
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  3. rs78540381[chr1:27863809]
Enhancers that have rs78540381[chr1:27863809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs78540381[chr1:27863809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27861998 27863865 ZNF274 GTRD no Blood (GM12878) 107802586
chr1 27863808 27863812 NFE TRANSFAC yes 27706474
Genes associated with rs78540381[chr1:27863809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More