EnhancerDB
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  3. rs78541084[chr2:238570688]
Enhancers that have rs78541084[chr2:238570688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78541084[chr2:238570688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238570681 238570694 ELF1 JASPAR yes 82128754
chr2 238570682 238570692 ELK1 JASPAR yes 82128755
chr2 238570682 238570694 EHF JASPAR yes 82128756
chr2 238570682 238570694 ELF1 JASPAR yes 82128757
chr2 238570682 238570694 ELF4 JASPAR yes 82128758
chr2 238570683 238570694 ETV2 JASPAR yes 82128759
chr2 238570684 238570693 ELK4 JASPAR yes 82128760
chr2 238570684 238570694 ELK1 JASPAR yes 82128761
chr2 238570684 238570694 ELK3 JASPAR yes 82128762
chr2 238570684 238570694 ERF JASPAR yes 82128763
chr2 238570684 238570694 ERG JASPAR yes 82128764
chr2 238570684 238570694 ETS1 JASPAR yes 82128765
chr2 238570684 238570694 ETV1 JASPAR yes 82128766
chr2 238570684 238570694 ETV3 JASPAR yes 82128767
chr2 238570684 238570694 ETV4 JASPAR yes 82128768
chr2 238570684 238570694 ETV5 JASPAR yes 82128769
chr2 238570684 238570694 ETV6 JASPAR yes 82128770
chr2 238570684 238570694 FEV JASPAR yes 82128771
chr2 238570684 238570694 FLI1 JASPAR yes 82128772
chr2 238570684 238570694 GABPA JASPAR yes 82128773
chr2 238570684 238570695 ELK4 JASPAR yes 82128774
chr2 238570684 238570695 FLI1 JASPAR yes 82128775
chr2 238570685 238570693 FEV JASPAR yes 82128776
chr2 238570686 238570692 ETS1 JASPAR yes 82128777
chr2 238570686 238570692 SPI1 JASPAR yes 82128778
chr2 238570688 238570703 HNF4G JASPAR yes 82128779
Genes associated with rs78541084[chr2:238570688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More