EnhancerDB
  1. Home
  2. SNP
  3. rs78544839[chr5:77813177]
Enhancers that have rs78544839[chr5:77813177]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78544839[chr5:77813177]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77813172 77813181 NFIX JASPAR yes 63595447
chr5 77813172 77813182 NFIA JASPAR yes 63595448
chr5 77813173 77813182 HIC2 JASPAR yes 63595449
chr5 77813174 77813180 NFIC JASPAR yes 63595450
Genes associated with rs78544839[chr5:77813177], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More