EnhancerDB
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Enhancers that have rs78550738[chr17:76774758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76732944 76776375 enh17413
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78550738[chr17:76774758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76774738 76774759 IRF1 JASPAR yes 56179538
chr17 76774753 76774763 HOXB13 JASPAR yes 56179543
chr17 76774753 76774763 HOXD13 JASPAR yes 56179544
chr17 76774754 76774764 ALX3 JASPAR yes 56179545
chr17 76774754 76774764 EMX2 JASPAR yes 56179546
chr17 76774754 76774764 ESX1 JASPAR yes 56179547
chr17 76774754 76774764 GSX1 JASPAR yes 56179548
chr17 76774754 76774764 GSX2 JASPAR yes 56179549
chr17 76774754 76774764 HOXA2 JASPAR yes 56179550
chr17 76774754 76774764 HOXB2 JASPAR yes 56179551
chr17 76774754 76774764 HOXB3 JASPAR yes 56179552
chr17 76774754 76774764 LBX2 JASPAR yes 56179553
chr17 76774754 76774764 LHX2 JASPAR yes 56179554
chr17 76774754 76774764 LHX6 JASPAR yes 56179555
chr17 76774754 76774764 MEOX1 JASPAR yes 56179556
chr17 76774754 76774764 MEOX2 JASPAR yes 56179557
chr17 76774754 76774764 MIXL1 JASPAR yes 56179558
chr17 76774754 76774764 NOTO JASPAR yes 56179559
chr17 76774755 76774763 BSX JASPAR yes 56179560
chr17 76774755 76774763 DLX6 JASPAR yes 56179561
chr17 76774755 76774763 EN1 JASPAR yes 56179562
chr17 76774755 76774763 ISX JASPAR yes 56179563
chr17 76774755 76774763 LBX1 JASPAR yes 56179564
chr17 76774755 76774763 LHX9 JASPAR yes 56179565
chr17 76774755 76774763 LMX1A JASPAR yes 56179566
chr17 76774755 76774763 LMX1B JASPAR yes 56179567
chr17 76774755 76774763 NKX6-1 JASPAR yes 56179568
chr17 76774755 76774763 NKX6-2 JASPAR yes 56179569
chr17 76774755 76774763 PAX4 JASPAR yes 56179570
chr17 76774755 76774763 PDX1 JASPAR yes 56179571
chr17 76774755 76774763 PRRX1 JASPAR yes 56179572
chr17 76774755 76774763 RAX2 JASPAR yes 56179573
chr17 76774755 76774763 SHOX JASPAR yes 56179574
chr17 76774755 76774763 UNCX JASPAR yes 56179575
chr17 76774755 76774763 VAX1 JASPAR yes 56179576
chr17 76774755 76774763 VAX2 JASPAR yes 56179577
chr17 76774755 76774763 VSX1 JASPAR yes 56179578
chr17 76774755 76774763 VSX2 JASPAR yes 56179579
chr17 76774755 76774765 POU6F2 JASPAR yes 56179580
Genes associated with rs78550738[chr17:76774758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More