EnhancerDB
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  3. rs78554736[chr1:173375521]
Enhancers that have rs78554736[chr1:173375521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs78554736[chr1:173375521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173375296 173375770 ZNF274 GTRD no Liver (HepG2) 21351268
chr1 173375405 173375771 ZNF274 GTRD no Liver (HepG2) 21351269
chr1 173375424 173375746 ZNF274 GTRD no Liver (HepG2) 21351270
chr1 173375507 173375523 POU4F2 JASPAR yes 33195944
chr1 173375509 173375521 FOXI1 JASPAR yes 33195945
chr1 173375509 173375523 POU4F1 JASPAR yes 33195946
chr1 173375509 173375524 HNF1A JASPAR yes 33195947
chr1 173375510 173375522 FOXC2 JASPAR yes 33195948
chr1 173375510 173375523 HNF1B JASPAR yes 33195949
chr1 173375510 173375524 ONECUT3 JASPAR yes 33195950
chr1 173375511 173375522 FOXB1 JASPAR yes 33195951
chr1 173375511 173375522 FOXC1 JASPAR yes 33195952
chr1 173375511 173375522 PROP1 JASPAR yes 33195953
chr1 173375512 173375527 FOXA1 JASPAR yes 33195955
chr1 173375513 173375528 FOXP1 JASPAR yes 33195956
chr1 173375514 173375525 FOXP2 JASPAR yes 33195957
chr1 173375514 173375526 FOXC2 JASPAR yes 33195958
chr1 173375514 173375528 POU1F1 JASPAR yes 33195959
chr1 173375515 173375526 FOXB1 JASPAR yes 33195960
chr1 173375515 173375526 FOXC1 JASPAR yes 33195961
chr1 173375516 173375527 FOXA1 JASPAR yes 33195963
chr1 173375519 173375526 NKX3-1 JASPAR yes 33195964
Genes associated with rs78554736[chr1:173375521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More